Static Public Member Functions | |
static Int | calculateDecompositionWeightsIsotopicPatterns (Size n_bins, const vector< double > &isotopic_intensities, const IsotopePatterns &patterns, MapRateToScoreType &map_rate_to_decomposition_weight, SIPPeptide &sip_peptide) |
> Perform the decomposition More... | |
static IsotopePatterns | calculateIsotopePatternsFor13CRange (const AASequence &peptide, Size additional_isotopes=5) |
static Size | getNumberOfLabelingElements (String labeling_element, const AASequence &peptide) |
static IsotopePatterns | calculateIsotopePatternsFor15NRange (const AASequence &peptide, Size additional_isotopes=5) |
static IsotopePatterns | calculateIsotopePatternsFor2HRange (const AASequence &peptide, Size additional_isotopes=5) |
static IsotopePatterns | calculateIsotopePatternsFor18ORange (const AASequence &peptide, Size additional_isotopes=5) |
static IsotopePatterns | calculateIsotopePatternsFor15NRangeOfAveraginePeptide (double mass) |
static IsotopePatterns | calculateIsotopePatternsFor13CRangeOfAveraginePeptide (double mass) |
static IsotopePatterns | calculateIsotopePatternsFor2HRangeOfAveraginePeptide (double mass) |
static IsotopePatterns | calculateIsotopePatternsFor18ORangeOfAveraginePeptide (double mass) |
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> Perform the decomposition
References SIPPeptide::charge, SIPPeptide::mass_diff, SIPPeptide::mz_theo, SIPPeptide::reconstruction, SIPPeptide::reconstruction_monoistopic, and SIPPeptide::RR.
Referenced by TOPPMetaProSIP::main_().
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> Given a peptide sequence calculate the theoretical isotopic patterns given all incorporations rate (13C Version) > extend isotopic patterns by additional_isotopes to collect other element higher isotopes at 100% incorporation
Referenced by TOPPMetaProSIP::main_().
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Referenced by TOPPMetaProSIP::main_().
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> Given a peptide sequence calculate the theoretical isotopic patterns given all incorporations rate (15C Version) > extend isotopic patterns by additional_isotopes to collect other element higher isotopes at 100% incorporation
Referenced by TOPPMetaProSIP::main_().
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Referenced by TOPPMetaProSIP::main_().
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Referenced by TOPPMetaProSIP::main_().
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Referenced by TOPPMetaProSIP::main_().
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Referenced by TOPPMetaProSIP::main_().
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Referenced by TOPPMetaProSIP::main_().
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Referenced by TOPPMetaProSIP::main_().
OpenMS / TOPP release 2.1.0 | Documentation generated on Sat Apr 8 2017 21:05:40 using doxygen 1.8.13 |